BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H08SP1|AL426605
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1772 1522 0.0
>3x_Contig1772
Length = 25851
Score = 1522 bits (767), Expect = 0.0
Identities = 787/794 (99%), Gaps = 4/794 (0%)
Strand = Plus / Plus
Query: 1 gatcaccgattgcttcccagtatcgaagagttccggaaaagtttccctcttatcagttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21861 gatcaccgattgcttcccagtatcgaagagttccggaaaagtttccctcttatcagttaa 21920
Query: 61 agaattacaatatattctgtttacttgcagtacagtgttgaataaaatccttaacatgat 120
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21921 agaattc----attttctgtttacttgcagtacagtgttgaataaaatccttaacatgat 21976
Query: 121 ataatgtcccacactttagaaaaagattcgcagtgtatagttccaaagcatatttcgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21977 ataatgtcccacactttagaaaaagattcgcagtgtatagttccaaagcatatttcgtta 22036
Query: 181 acggatcttcataattgtgatccatttcaccgttcaaattataaagatcatcaaatttca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22037 acggatcttcataattgtgatccatttcaccgttcaaattataaagatcatcaaatttca 22096
Query: 241 aaggttcaatacgaatgtctgcccaaagaagctgtttctcttcaaagatctcaccagtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22097 aaggttcaatacgaatgtctgcccaaagaagctgtttctcttcaaagatctcaccagtat 22156
Query: 301 gattttcaagctgttgattggaaaactgtaaacacaaaataaatttgaacaaacttaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22157 gattttcaagctgttgattggaaaactgtaaacacaaaataaatttgaacaaacttaatt 22216
Query: 361 gctgcaaagtttcgacgggactatcccatactggctcaggtagttcaatcattttatcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22217 gctgcaaagtttcgacgggactatcccatactggctcaggtagttcaatcattttatcaa 22276
Query: 421 tacaccattgcttcaactgtcgtccttgtaaactttcaatttccaaaagatgaagaataa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22277 tacaccattgcttcaactgtcgtccttgtaaactttcaatttccaaaagatgaagaataa 22336
Query: 481 cttcaccgaaataacgattcaaatcggagtcattacttttctcaccgtagcaaacaagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22337 cttcaccgaaataacgattcaaatcggagtcattacttttctcaccgtagcaaacaagca 22396
Query: 541 tagaactcatcctgctttaaatatccaatgagaatagcacaacctgggggtaagcmgtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 22397 tagaactcatcctgctttaaatatccaatgagaatagcacaacctgggggtaagcagtat 22456
Query: 601 tttactgaatacaccaacgtttcatcaagcctcgattgttaaggtaatgtggactaactt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22457 tttactgaatacaccaacgtttcatcaagcctcgattgttaaggtaatgtggactaactt 22516
Query: 661 atcataatcaaacataaaaaaagacacgctacatatacgcaaagaaagaccagaagataa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22517 atcataatcaaacataaaaaaagacacgctacatatacgcaaagaaagaccagaagataa 22576
Query: 721 gtttagttcgaaacaaacatgtaatcaagtatacattgaaatcaacattttgtgtcagtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22577 gtttagttcgaaacaaacatgtaatcaagtatacattgaaatcaacattttgtgtcagtt 22636
Query: 781 ttatgctgaaagga 794
||||||||||||||
Sbjct: 22637 ttatgctgaaagga 22650
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7198
Number of Sequences: 1807
Number of extensions: 7198
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)